CDS

Accession Number TCMCG017C22623
gbkey CDS
Protein Id OMO77916.1
Location complement(join(27858..28303,29597..29671,30173..30254,30341..30538,30669..31122,31348..32213))
GeneID InterPro:IPR001680
Organism Corchorus olitorius
locus_tag COLO4_24957

Protein

Length 706aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018854.1
Definition hypothetical protein COLO4_24957 [Corchorus olitorius]
Locus_tag COLO4_24957

EGGNOG-MAPPER Annotation

COG_category A
Description U4 U6 small nuclear ribonucleoprotein PRP4-like protein
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12662        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0001709        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007267        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0007292        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009560        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0017070        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0030621        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046540        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0097526        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAATTGATGAAGACAACAGTCCATCAACTTCAGCTGCAATTCCTGATGGCGATTCTATGGCTACTAACACTCCAATTCAGCCCATCCAGCCTATTGTTCCGCCAGTGATCCCACCTGCAGTTGTACCACCTATTGCCCCAATACCTGCAATTCCTCCTCCCGCAATTGTCCACCCATTGGCATCTCTCCCTATCCGCCCTCCTGTCCTTAAACCACCCATCCCTCAAAATGGTGAGGTAAAAACTAGTGATTCTGACTCTGACCATGAGGATGAAGGACAAGCTACTGCTGGTGAATATGAGATCTCAGAGGAGAGTAAACTGGTTAGAGAACGGCAAGAAAAGGCGATGCAAGAACTTCTGATGAAACGACGTGCTGCTGCACTAGCAGTGCCTACTAATGACATGGCTGTCCGGACTCGACTTCGCCGACTTGGTGAACCAATAACTCTTTTTGGAGAAAGAGAGATGGAAAGGCGAGATAGGTTGCGAATGCTTATGGCAAAGCTGGATTCAGAAGGACAGTTGGAGAAGTTAATGAAAGCTCACGAGGAGGAAGAAGCTGCAGTTTCTGCTAAGGTGGAGGAGATTGAGGAAGAGATCCAGTATCCCTTTTATACCGAGGGTCCAAACGAACTCTTGGATGCTAGAATTGATATTGCAAAGTACTCTCTTGTAAAGGCAGCTGCACGTCTTCAACATGCACGGCGAAAAAGAGAAGATCCAGATGAAGATATGGATGCTGAAATCGATTGGGTTCTAAAGCAGGCGGAGAATTTGGCTCTTGATTGCAGTGTGATTGGGGATGATAGACCACTTTCGGGTTGTTCTTTCTCATATGATGGAAAATTTCTTGCCACCTGCTCTTTGAGTGGAGTTGCTAAGTTGTGGTCAATGCCTAAGGTAAGCAAGCATTCAATCGTAAAAGGCCACACGGAACGTGCAACTGATGTTACATTTTCTCCTGTGTCTAGTCATCTAGCAACTGCTTCTGCTGATCGAACAGCAAAGTTGTGGAACTCTGATGGATTACTGCTAAAAACATTCGAGGGCCATCTGGATCGCCTTGCACGTATTGCCTTCCATCCTTCAGGGAAGTACCTTGGTACAACAAGCTTTGATAAAACATGGAGACTGTGGGACATAGACAGTGGGGTGGAGTTGCTCCTCCAAGAAGGTCATAGTAGAAGTGTCTATGGAATTGCCTTCCACAAGGATGGATCTTTAGCAGCATCCTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGCACAGGGAGAAGTATTCTTGCCCTGGAAGGGCATGTCAAGCCGGTCCTTGGTGTTAGTTTTTCACCCAACGGCTATCATTTAGCCACAGGTGGTGAAGATAATACTTGTCGCATATGGGATTTGAGGAAGAAAAAGTCCCTGTACATCATACCAGCCCATTCAAATCTTATATCACAAGTGAAGTTTGAGCCACAAGAGGGATATTACTTGGTCACTGCTTCTTATGACATGACTGCAAAGGTTTGGTCTGGCAGAGATTTTAAGCCTGTCAAAAGCTTACAAGGTCACGAAGCTAAAGTAACCGGTCTAGATATCCGTGAAGATGGCTGTATCGCTACAGTTTCTCATGATCGAACAATAAAGCTATGGACTGCTGGTAAAAGCGATATGGATGCTGTTTGGCTCCGAGCAAATGTGGCAAAGGACGTGGGACTTTTTTTTTGGTTAAAAAAGGACGTGGGACTTGCTTTGGCTTCTAAGAGAACAAAGGCTAGTGTGGATCAGTTAGTCTCATGGAAGGCGAAGCCACCCAATCCGGGTTTCTACATTCTCAACACCAATGGGGCTTTTAAAGCCAATGCAAACATAGCCTTGGCAGGTGGATTGCTACGTAATAGTAATGGTCAATGGCTTGCAGGGTTCGCAGTCAACATTGGTTACACTGATAGTCCAACGGCGGAACTATGGGGTGTACGTGAGGGGCTTTTATTGGCAAGGCAGCTTGGTCTCGATCAAGTTATAATGGAGCTTGATGCAGCAATTGTAGTAAACTTCTCAACAGAAAATGTAGCGGATTCCCACCCTTTTTCGGTTTTAGTTCATGACACTTTTGGCAATAATTAA
Protein:  
MEIDEDNSPSTSAAIPDGDSMATNTPIQPIQPIVPPVIPPAVVPPIAPIPAIPPPAIVHPLASLPIRPPVLKPPIPQNGEVKTSDSDSDHEDEGQATAGEYEISEESKLVRERQEKAMQELLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMLMAKLDSEGQLEKLMKAHEEEEAAVSAKVEEIEEEIQYPFYTEGPNELLDARIDIAKYSLVKAAARLQHARRKREDPDEDMDAEIDWVLKQAENLALDCSVIGDDRPLSGCSFSYDGKFLATCSLSGVAKLWSMPKVSKHSIVKGHTERATDVTFSPVSSHLATASADRTAKLWNSDGLLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSVYGIAFHKDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSGRDFKPVKSLQGHEAKVTGLDIREDGCIATVSHDRTIKLWTAGKSDMDAVWLRANVAKDVGLFFWLKKDVGLALASKRTKASVDQLVSWKAKPPNPGFYILNTNGAFKANANIALAGGLLRNSNGQWLAGFAVNIGYTDSPTAELWGVREGLLLARQLGLDQVIMELDAAIVVNFSTENVADSHPFSVLVHDTFGNN